<?xml version="1.0" encoding="UTF-8"?><rss xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:content="http://purl.org/rss/1.0/modules/content/" xmlns:atom="http://www.w3.org/2005/Atom" version="2.0"><channel><title><![CDATA[RSS Feed]]></title><description><![CDATA[RSS Feed]]></description><link>http://direct.ecency.com</link><image><url>http://direct.ecency.com/logo512.png</url><title>RSS Feed</title><link>http://direct.ecency.com</link></image><generator>RSS for Node</generator><lastBuildDate>Tue, 21 Apr 2026 11:53:29 GMT</lastBuildDate><atom:link href="http://direct.ecency.com/created/namd/rss.xml" rel="self" type="application/rss+xml"/><item><title><![CDATA[Wanna see how a protein interacting with a membrane? (A molecular dynamics simulation)]]></title><description><![CDATA[Main aim of this post is to attract questions. So Shoot your questions in comments. I will try answering you and give explanations. May be future articles too!]]></description><link>http://direct.ecency.com/molecular-dynamics/@dexterdev/wanna-see-how-a-protein-interacting-with-a-membrane-a-molecular-dynamics-simulation</link><guid isPermaLink="true">http://direct.ecency.com/molecular-dynamics/@dexterdev/wanna-see-how-a-protein-interacting-with-a-membrane-a-molecular-dynamics-simulation</guid><category><![CDATA[molecular-dynamics]]></category><dc:creator><![CDATA[dexterdev]]></dc:creator><pubDate>Wed, 10 Jan 2018 07:15:00 GMT</pubDate><enclosure url="https://images.ecency.com/p/S5Eokt4BcQdk7EHeT1aYjzebg2hC7hkthT45eMd163EKDNaESpX52Qxv2pterVUVyEYw4GN?format=match&amp;mode=fit" length="0" type="false"/></item><item><title><![CDATA[Principal Component Analysis for analyzing molecular dynamics trajectory]]></title><description><![CDATA[I wanted to explain the process of implementing PCA (Principal Component Analysis) on your MD (molecular dynamics) trajectories. Here I do it on NAMD generated DCD files. The example files are taken from]]></description><link>http://direct.ecency.com/namd/@dexterdev/principal-component-analysis-for-analyzing-molecular-dynamics-trajectory</link><guid isPermaLink="true">http://direct.ecency.com/namd/@dexterdev/principal-component-analysis-for-analyzing-molecular-dynamics-trajectory</guid><category><![CDATA[namd]]></category><dc:creator><![CDATA[dexterdev]]></dc:creator><pubDate>Fri, 05 Jan 2018 14:35:36 GMT</pubDate><enclosure url="https://images.ecency.com/p/2FFvzA2zeqoVZ5NRzV2o8MyJEzowAL6rjbt8w3dTGeBuzwvQELUvBuK48Dmzjj7jUnKvAzmb6eerdErchQvz4aq7S8fxLbSyK1bF7qi6ZZqXfHYHmsedrKsjN428e?format=match&amp;mode=fit" length="0" type="false"/></item></channel></rss>